[Building Sakai] AuthzPermissionException Thrown After Upgrading from 2.7.1 to 2.9.3

[Steve Swinsburg]

Can you confirm the order of operations here? You should have
1. Import dump into new db
2. Run all upgrade scripts from 2.7.1 onwards in order to bring it up to
2.9.3
3. Start sakai.

Cheers
Steve

sent from my mobile device
On 03/05/2014 3:12 AM, "BJ Peter DeLaCruz" <bjpeter2008 at gmail.com> wrote:

> Hi,
>
> I have a MySQL database dump (table structures) for Sakai 2.7.1, and I am
> trying to upgrade the database to Sakai 2.9.3. The scripts upgraded the
> database fine, but when I start up Tomcat, I see the following errors in
> the log file. There is no data in the database.
>
> Is the admin user automatically created by Sakai when it starts up for the
> first time and the database is empty? How can I fix this error? I am
> upgrading the database on Windows 7, and I am running MySQL 5.6.16.
>
> Thanks,
> BJ
>
> org.springframework.beans.factory.BeanCreationException: Error creating
> bean with name
> 'org.theospi.portfolio.security.DefaultRealmManager.portfolio' defined in
> file
> [C:\opt2\apache-tomcat-7.0.52\components\osp-common-component\WEB-INF\components.xml]:
> Invocation of init method failed; nested exception is
> java.lang.RuntimeException:
> org.sakaiproject.authz.api.AuthzPermissionException user=admin
> function=realm.add resource=/realm/!site.template.portfolio
>  at
> org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1338)
>  at
> org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:473)
>  at
> org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory$1.run(AbstractAutowireCapableBeanFactory.java:409)
>  at java.security.AccessController.doPrivileged(Native Method)
> at
> org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:380)
>  at
> org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:264)
> at
> org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222)
>  at
> org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:261)
> at
> org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:185)
>  at
> org.sakaiproject.util.NoisierDefaultListableBeanFactory.getBean(NoisierDefaultListableBeanFactory.java:112)
> at
> org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:164)
>  at
> org.sakaiproject.util.NoisierDefaultListableBeanFactory.preInstantiateSingletons(NoisierDefaultListableBeanFactory.java:73)
>  at
> org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:728)
>  at
> org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:380)
> at
> org.sakaiproject.component.impl.SpringCompMgr.init(SpringCompMgr.java:160)
>  at
> org.sakaiproject.component.cover.ComponentManager.getInstance(ComponentManager.java:98)
> at
> org.sakaiproject.component.cover.ComponentManager.get(ComponentManager.java:107)
>  at
> org.sakaiproject.component.cover.ServerConfigurationService.getInstance(ServerConfigurationService.java:52)
> at org.sakaiproject.util.RequestFilter.init(RequestFilter.java:811)
>  at
> org.apache.catalina.core.ApplicationFilterConfig.initFilter(ApplicationFilterConfig.java:279)
> at
> org.apache.catalina.core.ApplicationFilterConfig.getFilter(ApplicationFilterConfig.java:260)
>  at
> org.apache.catalina.core.ApplicationFilterConfig.<init>(ApplicationFilterConfig.java:105)
> at
> org.apache.catalina.core.StandardContext.filterStart(StandardContext.java:4809)
>  at
> org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5485)
> at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:150)
>  at
> org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:901)
> at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:877)
>  at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:632)
> at org.apache.catalina.startup.HostConfig.deployWAR(HostConfig.java:1073)
>  at
> org.apache.catalina.startup.HostConfig$DeployWar.run(HostConfig.java:1857)
> at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:439)
>  at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)
> at java.util.concurrent.FutureTask.run(FutureTask.java:138)
>  at
> java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:895)
> at
> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:918)
>  at java.lang.Thread.run(Thread.java:662)
> Caused by: java.lang.RuntimeException:
> org.sakaiproject.authz.api.AuthzPermissionException user=admin
> function=realm.add resource=/realm/!site.template.portfolio
>  at
> org.theospi.portfolio.security.model.DefaultRealmManagerImpl.init(DefaultRealmManagerImpl.java:75)
> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>  at
> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
> at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
>  at java.lang.reflect.Method.invoke(Method.java:597)
> at
> org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeCustomInitMethod(AbstractAutowireCapableBeanFactory.java:1414)
>  at
> org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1375)
>  at
> org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1335)
>  ... 35 more
> Caused by: org.sakaiproject.authz.api.AuthzPermissionException user=admin
> function=realm.add resource=/realm/!site.template.portfolio
>  at
> org.sakaiproject.authz.impl.BaseAuthzGroupService.unlock(BaseAuthzGroupService.java:163)
> at
> org.sakaiproject.authz.impl.BaseAuthzGroupService.addAuthzGroup(BaseAuthzGroupService.java:712)
>  at
> org.theospi.portfolio.security.model.DefaultRealmManagerImpl.init(DefaultRealmManagerImpl.java:69)
> ... 42 more
> java.lang.Exception: traceback
> at
> org.sakaiproject.util.NoisierDefaultListableBeanFactory.destroySingletons(NoisierDefaultListableBeanFactory.java:94)
>  at
> org.sakaiproject.util.NoisierDefaultListableBeanFactory.preInstantiateSingletons(NoisierDefaultListableBeanFactory.java:83)
>  at
> org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:728)
>  at
> org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:380)
> at
> org.sakaiproject.component.impl.SpringCompMgr.init(SpringCompMgr.java:160)
>  at
> org.sakaiproject.component.cover.ComponentManager.getInstance(ComponentManager.java:98)
> at
> org.sakaiproject.component.cover.ComponentManager.get(ComponentManager.java:107)
>  at
> org.sakaiproject.component.cover.ServerConfigurationService.getInstance(ServerConfigurationService.java:52)
> at org.sakaiproject.util.RequestFilter.init(RequestFilter.java:811)
>  at
> org.apache.catalina.core.ApplicationFilterConfig.initFilter(ApplicationFilterConfig.java:279)
> at
> org.apache.catalina.core.ApplicationFilterConfig.getFilter(ApplicationFilterConfig.java:260)
>  at
> org.apache.catalina.core.ApplicationFilterConfig.<init>(ApplicationFilterConfig.java:105)
> at
> org.apache.catalina.core.StandardContext.filterStart(StandardContext.java:4809)
>  at
> org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5485)
> at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:150)
>  at
> org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:901)
> at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:877)
>  at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:632)
> at org.apache.catalina.startup.HostConfig.deployWAR(HostConfig.java:1073)
>  at
> org.apache.catalina.startup.HostConfig$DeployWar.run(HostConfig.java:1857)
> at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:439)
>  at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)
> at java.util.concurrent.FutureTask.run(FutureTask.java:138)
>  at
> java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:895)
> at
> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:918)
>  at java.lang.Thread.run(Thread.java:662)
>
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