[Building Sakai] Starting up Sakai 2.6 on mysql fails?
Stephen Marquard
stephen.marquard at uct.ac.za
Fri Aug 21 13:04:46 PDT 2009
I'm afraid I don't have a clueful ideal about what java.lang.AbstractMethodError actually means.
What version of the kernel did you start with, and what 2.6 source are you building with? (e.g. 2.6.0 or 2-6-x branch)
Try:
find . -name 'sakai-kernel*'
in your tomcat to check that you don't have more than one version of the kernel jars. You should have something like:
./common/lib/sakai-kernel-common-1.0.11.jar
./components/entitybroker-pack/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./components/sakai-announcement-pack/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./components/sakai-comp-help/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./components/sakai-courier-pack/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./components/sakai-import/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./components/sakai-kernel-component
./components/sakai-kernel-component/META-INF/maven/org.sakaiproject.kernel/sakai-kernel-component
./components/sakai-kernel-component/WEB-INF/lib/sakai-kernel-impl-1.0.11.jar
./components/sakai-kernel-component/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./components/sakai-portal-render-pack/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./components/sakai-portal-service-pack/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./components/sakai-site-manage-pack/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./components/sms-pack/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./shared/lib/sakai-kernel-api-1.0.11.jar
./shared/lib/sakai-kernel-private-1.0.11.jar
./webapps/access/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./webapps/authn/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./webapps/direct/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./webapps/library/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./webapps/mercury/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./webapps/portal/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./webapps/portal-render/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./webapps/providers/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./webapps/sakai-alias-tool/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./webapps/sakai-archive-tool/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./webapps/sakai-authz-tool/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./webapps/sakai-content-tool/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./webapps/sakai-help-tool/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./webapps/sakai-login-tool/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./webapps/sakai-memory-tool/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./webapps/sakai-message-tool/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./webapps/sakai-profile-tool/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./webapps/sakai-scheduler-tool/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./webapps/sakai-site-manage-group-helper/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./webapps/sakai-site-manage-group-section-role-helper/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./webapps/sakai-site-manage-participant-helper/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./webapps/sakai-site-manage-tool/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./webapps/sakai-site-pageorder-helper/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./webapps/sakai-site-tool/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./webapps/sakai-tool-tool-su/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./webapps/sakai-user-tool/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./webapps/tool/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
./webapps/web/WEB-INF/lib/sakai-kernel-util-1.0.11.jar
Regards
Stephen
>>> Nicola Monat-Jacobs <nicola at nyu.edu> 8/21/2009 9:56 PM >>>
We're also adding a few things to kernel (to make sakai-xythos
integration work), if that a consideration.
I've got Java 1.5.0_19.
Could still be conflicting jars - any good way to tell if that's the
culprit?
Nicola
On Aug 21, 2009, at 1:36 AM, Stephen Marquard wrote:
> My tomcat theory is based on this error:
>
> java.lang.AbstractMethodError:
> org.sakaiproject.authz.impl.SakaiSecurity$$EnhancerByCGLIB$
> $7cb29c7a.getUserEffectiveRole(Ljava/lang/String;)Ljava/lang/String;
>
> because getUserEffectiveRole was a method added to the
> SecurityService API (in the kernel) during 2-6-x development but
> before 2.6.0 release.
>
> If it's not a problem of conflicting jars of different versions,
> then maybe some other classloader issue? Are you building & running
> with jdk 1.5?
>
> Regards
> Stephen
>
>>>> Nicola Monat-Jacobs <nicola at nyu.edu> 8/20/2009 11:07 PM >>>
> Still can't get rid of this error (now after two fresh tomcat
> rounds)...
>
> In the interest of full disclosure, I do have another tomcat running
> on a different port - xythos is on 8080 and sakai on 8181 (separate
> tomcats). Perhaps this might be causing the clash Stephen is alluding
> to?
>
> Also, I'm now using
> hibernate.dialect=org.hibernate.dialect.MySQLDialect
>
> Thanks,
> Nicola
>
> On Aug 20, 2009, at 3:51 PM, Anthony Whyte wrote:
>
>> Indeed, an unwashed Tomcat is a foul thing.
>>
>> Anth
>>
>>
>>
>> On Aug 20, 2009, at 3:14 PM, Nicola Monat-Jacobs wrote:
>>
>>> Unfortunately, Anthony's suggestion didn't work, but Stephen
>>> suggested (offline) the following. Wanted to post for posterity.
>>>
>>> On Aug 20, 2009, at 3:04 PM, Stephen Marquard wrote:
>>>
>>>> Hi Nicola,
>>>>
>>>> My UCT mail is down at the moment so I can't post to sakai-dev,
>>>> but your 2-6-x failure is probably a result of having older
>>>> (pre-2.6.0) build artefacts in your tomcat deployment or possibly
>>>> maven repo.
>>>>
>>>> You should start with a clean tomcat every time.
>>>>
>>>> Here's a build / install script for building on a Linux box.
>>>>
>>>> http://source.cet.uct.ac.za/svn/sakai/build/branches/sakai-trunk/sakai-build.sh
>>>> http://source.cet.uct.ac.za/svn/sakai/build/branches/sakai-trunk/sakai-install.sh
>>>>
>>>> (installs into /usr/local/sakai/). I use something very similar on
>>>> my Mac.
>>>>
>>>> Cheers
>>>> Stephen
>>>>
>>>
>>> On Aug 20, 2009, at 2:23 PM, Anthony Whyte wrote:
>>>
>>>> Looking at the Hibernate docs there are a number of MySQL specific
>>>> sub-classes that extend org.hibernate.dialect.Dialect. See
>>>>
>>>> https://www.hibernate.org/hib_docs/v3/api/org/hibernate/dialect/Dialect.html
>>>>
>>>> MySQLDialect
>>>> MySQLInnoDBDialect
>>>> MySQLMyISAMDialect
>>>> MySQL5Dialect
>>>> MySQL5InnoDBDialect
>>>>
>>>>
>>>> On Aug 20, 2009, at 2:02 PM, Anthony Whyte wrote:
>>>>
>>>>> As an experiment change the hibernate.dialect from
>>>>>
>>>>> hibernate.dialect=org.hibernate.dialect.MySQLInnoDBDialect
>>>>>
>>>>> to
>>>>>
>>>>> hibernate.dialect=org.hibernate.dialect.MySQLDialect
>>>>>
>>>>> restart Tomcat and see if you can log in.
>>>>>
>>>>> cheers,
>>>>>
>>>>> Anth
>>>>>
>>>>>
>>>>> Dialects
>>>>>
>>>>> MySQL org.hibernate.dialect.MySQLDialect
>>>>> MySQL with InnoDB org.hibernate.dialect.MySQLInnoDBDialect
>>>>> MySQL with MyISAM org.hibernate.dialect.MySQLMyISAMDialect
>>>>>
>>>>>
>>>>>
>>>>> On Aug 20, 2009, at 1:23 PM, Nicola Monat-Jacobs wrote:
>>>>>
>>>>>> Hi -
>>>>>>
>>>>>> I've having the very frustrating problem where I can't get 2.6
>>>>>> working locally on my mac. I have MySQL 5.0.84 installed with
>>>>>> the following settings in sakai.properties:
>>>>>>
>>>>>> ## MySQL settings - make sure to alter as appropriate
>>>>>> vendor at org.sakaiproject.db.api.SqlService=mysql
>>>>>> driverClassName at javax.sql.BaseDataSource=com.mysql.jdbc.Driver
>>>>>> hibernate.dialect=org.hibernate.dialect.MySQLInnoDBDialect
>>>>>> url at javax.sql.BaseDataSource=jdbc:mysql://127.0.0.1:3306/sakai?
>>>>>> useUnicode=true&characterEncoding=UTF-8
>>>>>> validationQuery at javax.sql.BaseDataSource=select 1 from DUAL
>>>>>> defaultTransactionIsolationString
>>>>>> @javax.sql.BaseDataSource=TRANSACTION_READ_COMMITTED
>>>>>>
>>>>>> I can log in to MySQL just fine with the username and password
>>>>>> that I have in sakai.properties. I have created the sakai
>>>>>> database with
>>>>>> create database sakai default character set utf8;
>>>>>> Sakai starts up fine (so the subject of this email is a little
>>>>>> misleading), but as soon as I try to login with admin/admin I
>>>>>> get the following stack trace and can't proceed. I've dropped
>>>>>> and recreated the database a couple times. Anyone have any ideas?
>>>>>>
>>>>>> Thanks!
>>>>>> Nicola
>>>>>>
>>>>>> 2009-08-20 13:17:58,293 WARN http-8181-Processor25
>>>>>> org.sakaiproject.portal.util.ErrorReporter - Bug Report bug-id:
>>>>>> 720ace5e-4805-47d0-a9fb-8ad96d8c9b6c user: admin usage-session:
>>>>>> 5baa8c1b-01eb-4c4e-a63f-f982c969d581 time: Aug 20, 2009 13:17:58
>>>>>> user comment: null stack trace
>>>>>> java.lang.AbstractMethodError:
>>>>>> org.sakaiproject.authz.impl.SakaiSecurity$$EnhancerByCGLIB$
>>>>>> $7cb29c7a.getUserEffectiveRole(Ljava/lang/String;)Ljava/lang/
>>>>>> String;
>>>>>> at
>>>>>> org
>>>>>> .sakaiproject
>>>>>> .authz
>>>>>> .cover.SecurityService.getUserEffectiveRole(SecurityService.java:
>>>>>> 161)
>>>>>> at
>>>>>> org
>>>>>> .sakaiproject
>>>>>> .portal.charon.handlers.SiteHandler.includeTabs(SiteHandler.java:
>>>>>> 453)
>>>>>> at
>>>>>> org
>>>>>> .sakaiproject
>>>>>> .portal
>>>>>> .charon.handlers.SiteHandler.includeSiteNav(SiteHandler.java:370)
>>>>>> at
>>>>>> org
>>>>>> .sakaiproject
>>>>>> .portal.charon.handlers.SiteHandler.doSite(SiteHandler.java:219)
>>>>>> at
>>>>>> org
>>>>>> .sakaiproject
>>>>>> .portal.charon.handlers.SiteHandler.doGet(SiteHandler.java:113)
>>>>>> at
>>>>>> org
>>>>>> .sakaiproject
>>>>>> .portal
>>>>>> .charon.SkinnableCharonPortal.doGet(SkinnableCharonPortal.java:
>>>>>> 768)
>>>>>> at javax.servlet.http.HttpServlet.service(HttpServlet.java:
>>>>>> 627)
>>>>>> at javax.servlet.http.HttpServlet.service(HttpServlet.java:
>>>>>> 729)
>>>>>> at
>>>>>> org
>>>>>> .apache
>>>>>> .catalina
>>>>>> .core
>>>>>> .ApplicationFilterChain
>>>>>> .internalDoFilter(ApplicationFilterChain.java:269)
>>>>>> at
>>>>>> org
>>>>>> .apache
>>>>>> .catalina
>>>>>> .core
>>>>>> .ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
>>>>>> at
>>>>>> org.sakaiproject.util.RequestFilter.doFilter(RequestFilter.java:
>>>>>> 616)
>>>>>> at
>>>>>> org
>>>>>> .apache
>>>>>> .catalina
>>>>>> .core
>>>>>> .ApplicationFilterChain
>>>>>> .internalDoFilter(ApplicationFilterChain.java:215)
>>>>>> at
>>>>>> org
>>>>>> .apache
>>>>>> .catalina
>>>>>> .core
>>>>>> .ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
>>>>>> at
>>>>>> org
>>>>>> .apache
>>>>>> .catalina
>>>>>> .core.StandardWrapperValve.invoke(StandardWrapperValve.java:213)
>>>>>> at
>>>>>> org
>>>>>> .apache
>>>>>> .catalina
>>>>>> .core.StandardContextValve.invoke(StandardContextValve.java:172)
>>>>>> at
>>>>>> org
>>>>>> .apache
>>>>>> .catalina.core.StandardHostValve.invoke(StandardHostValve.java:
>>>>>> 127)
>>>>>> at
>>>>>> org
>>>>>> .apache
>>>>>> .catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:
>>>>>> 117)
>>>>>> at
>>>>>> org
>>>>>> .apache
>>>>>> .catalina
>>>>>> .core.StandardEngineValve.invoke(StandardEngineValve.java:108)
>>>>>> at
>>>>>> org
>>>>>> .apache
>>>>>> .catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:174)
>>>>>> at
>>>>>> org
>>>>>> .apache
>>>>>> .coyote.http11.Http11Processor.process(Http11Processor.java:875)
>>>>>> at org.apache.coyote.http11.Http11BaseProtocol
>>>>>> $
>>>>>> Http11ConnectionHandler
>>>>>> .processConnection(Http11BaseProtocol.java:665)
>>>>>> at
>>>>>> org
>>>>>> .apache
>>>>>> .tomcat
>>>>>> .util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:528)
>>>>>> at
>>>>>> org
>>>>>> .apache
>>>>>> .tomcat
>>>>>> .util
>>>>>> .net
>>>>>> .LeaderFollowerWorkerThread
>>>>>> .runIt(LeaderFollowerWorkerThread.java:81)
>>>>>> at org.apache.tomcat.util.threads.ThreadPool
>>>>>> $ControlRunnable.run(ThreadPool.java:689)
>>>>>> at java.lang.Thread.run(Thread.java:613)
>>>>>>
>>>>>> Tool Placement:
>>>>>> No Placement
>>>>>>
>>>>>> Request:
>>>>>> : AuthType:null
>>>>>> : CharEncoding:UTF-8
>>>>>> : ContentLength:-1
>>>>>> : ContentType:null
>>>>>> : ContextPath:/portal
>>>>>> : LocalAddress:127.0.0.1
>>>>>> : LocalName:localhost
>>>>>> : LocalPort:8181
>>>>>> : Method:GET
>>>>>> : PathInfo:/
>>>>>> : Protocol:HTTP/1.1
>>>>>> : QueryString:null
>>>>>> : RemoteAddress:127.0.0.1
>>>>>> : RemoteHost:127.0.0.1
>>>>>> : RemotePort:62136
>>>>>> : Requested URL:http://localhost:8181/portal
>>>>>> : Scheme:http
>>>>>> : ServerName:localhost
>>>>>> : Headers:
>>>>>> : Header:host:localhost:8181
>>>>>> : Header:user-agent:Mozilla/5.0 (Macintosh; U; Intel Mac
>>>>>> OS X 10_5_7; en-us) AppleWebKit/530.18 (KHTML, like Gecko)
>>>>>> Version/4.0.1 Safari/530.18
>>>>>> : Header:accept-language:en-us
>>>>>> : Header:accept-encoding:gzip, deflate
>>>>>> : Header:referer:http://localhost:8181/portal
>>>>>> : Header:accept:application/xml,application/xhtml
>>>>>> +xml,text/html;q=0.9,text/plain;q=0.8,image/png,*/*;q=0.5
>>>>>> : Header:origin:http://localhost:8181
>>>>>> : Header:cookie:---censored---
>>>>>> : Header:connection:keep-alive
>>>>>> : Parameters:
>>>>>> : Attributes:
>>>>>> :
>>>>>> Attribute:sakai
>>>>>> .session:org.sakaiproject.tool.impl.SessionComponent
>>>>>> $MySession at 457d181f
>>>>>> :
>>>>>> Attribute:sakai
>>>>>> .character.encoding.done:sakai.character.encoding.done
>>>>>> : Attribute:sakai.filtered:sakai.filtered
>>>>>> Session:
>>>>>> : Created:1250788674649
>>>>>> : LastAccess:1250788678272
>>>>>> : MaxInactive:3600
>>>>>> : Attributes:
>>>>>> : Attribute:portalskin:defaultskin
>>>>>>
>>>>>> 2009-08-20 13:17:58,299 WARN http-8181-Processor25
>>>>>> org.sakaiproject.email.impl.BasicEmailService - send:
>>>>>> javax.mail.internet.AddressException: Illegal address in string
>>>>>> ``''
>>>>>>
>>>>>> _______________________________________________
>>>>>> sakai-dev mailing list
>>>>>> sakai-dev at collab.sakaiproject.org
>>>>>> http://collab.sakaiproject.org/mailman/listinfo/sakai-dev
>>>>>>
>>>>>> TO UNSUBSCRIBE: send email to sakai-dev-unsubscribe at collab.sakaiproject.org
>>>>>> with a subject of "unsubscribe"
>>>>>
>>>>> _______________________________________________
>>>>> sakai-dev mailing list
>>>>> sakai-dev at collab.sakaiproject.org
>>>>> http://collab.sakaiproject.org/mailman/listinfo/sakai-dev
>>>>>
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>>>>> with a subject of "unsubscribe"
>>>>
>>>
>>
>
>
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