[Building Sakai] Slow permissions checks in large sites (mysql)

Stephen Marquard stephen.marquard at uct.ac.za
Fri May 3 05:22:17 PDT 2013


5.1.68

Regards
Stephen

-----Original Message-----
From: azeckoski at gmail.com [mailto:azeckoski at gmail.com] On Behalf Of Aaron Zeckoski
Sent: 03 May 2013 02:20 PM
To: Stephen Marquard
Cc: sakai-dev
Subject: Re: [Building Sakai] Slow permissions checks in large sites (mysql)

What version of MySQL?
-AZ


On Fri, May 3, 2013 at 7:28 AM, Stephen Marquard
<stephen.marquard at uct.ac.za> wrote:
> This seems to be on of those cases where mysql can pick the wrong index.
> Adding some “force index” statements seems to help:
>
>
>
> mysql> explain select count(1) from   SAKAI_REALM_RL_FN MAINTABLE force
> index (PRIMARY)        LEFT JOIN SAKAI_REALM_RL_GR GRANTED_ROLES force index
> (PRIMARY) ON (MAINTABLE.REALM_KEY = GRANTED_ROLES.REALM_KEY AND
>
>     ->   MAINTABLE.ROLE_KEY = GRANTED_ROLES.ROLE_KEY), SAKAI_REALM REALMS ,
> SAKAI_REALM_FUNCTION FUNCTIONS where  (MAINTABLE.ROLE_KEY in(2,1) or
> (GRANTED_ROLES.USER_ID = 'dd816dde-f2e5-4944-9663-c433d8b9b8ac' AND
> GRANTED_ROLES.ACTIVE = 1))
>
>     ->   AND FUNCTIONS.FUNCTION_NAME = 'annc.all.groups' AND REALMS.REALM_ID
> in ('/site/81791de6-6b18-4b7e-8e5a-9c2e404d1314')   AND MAINTABLE.REALM_KEY
> = REALMS.REALM_KEY AND MAINTABLE.FUNCTION_KEY = FUNCTIONS.FUNCTION_KEY;
>
>
>
> +----+-------------+---------------+-------+--------------------------------------------------------------+------------------------------+---------+--------------------------+------+--------------------------+
>
> | id | select_type | table         | type  | possible_keys
> | key                          | key_len | ref                      | rows |
> Extra                    |
>
> +----+-------------+---------------+-------+--------------------------------------------------------------+------------------------------+---------+--------------------------+------+--------------------------+
>
> |  1 | SIMPLE      | REALMS        | const | PRIMARY,AK_SAKAI_REALM_ID
> | AK_SAKAI_REALM_ID            | 767     | const                    |    1 |
> Using index              |
>
> |  1 | SIMPLE      | FUNCTIONS     | const |
> PRIMARY,IE_SAKAI_REALM_FUNCTION_NAME,SAKAI_REALM_FUNCTION_KN |
> IE_SAKAI_REALM_FUNCTION_NAME | 299     | const                    |    1 |
> Using index              |
>
> |  1 | SIMPLE      | MAINTABLE     | ref   | PRIMARY
> | PRIMARY                      | 4       | const                    |  550 |
> Using where; Using index |
>
> |  1 | SIMPLE      | GRANTED_ROLES | ref   | PRIMARY
> | PRIMARY                      | 4       | vula.MAINTABLE.REALM_KEY | 1548 |
> Using where              |
>
> +----+-------------+---------------+-------+--------------------------------------------------------------+------------------------------+---------+--------------------------+------+--------------------------+
>
> 4 rows in set (0.00 sec)
>
>
>
> Regards
>
> Stephen
>
>
>
> ---
>
> Stephen Marquard, Acting Director
>
> Centre for Educational Technology, University of Cape Town
> http://www.cet.uct.ac.za
> stephen.marquard at uct.ac.za
> Phone: +27-21-650-5037 Cell: +27-83-500-5290
>
>
>
> From: sakai-dev-bounces at collab.sakaiproject.org
> [mailto:sakai-dev-bounces at collab.sakaiproject.org] On Behalf Of Stephen
> Marquard
> Sent: 03 May 2013 12:44 PM
> To: sakai-dev
> Subject: [Building Sakai] Slow permissions checks in large sites (mysql)
>
>
>
> Hi all,
>
>
>
> We have some performance issues on 2.9.x with mysql that look related to
> this query described in:
>
>
>
> https://jira.sakaiproject.org/browse/SAK-10193
>
>
>
> Though a mysql explain suggests that the query is well-behaved, in fact it
> is not and is producing execution times of up to 30s scanning 150K+ rows in
> some cases.
>
>
>
> mysql> explain     select count(1) from   SAKAI_REALM_RL_FN MAINTABLE
> LEFT JOIN SAKAI_REALM_RL_GR GRANTED_ROLES ON (MAINTABLE.REALM_KEY =
> GRANTED_ROLES.REALM_KEY AND
>
>     ->   MAINTABLE.ROLE_KEY = GRANTED_ROLES.ROLE_KEY), SAKAI_REALM REALMS,
> SAKAI_REALM_FUNCTION FUNCTIONS where  (MAINTABLE.ROLE_KEY in(2,1) or
> (GRANTED_ROLES.USER_ID = 'dd816dde-f2e5-4944-9663-c433d8b9b8ac' AND
> GRANTED_ROLES.ACTIVE = 1))
>
>     ->   AND FUNCTIONS.FUNCTION_NAME = 'annc.all.groups' AND REALMS.REALM_ID
> in ('/site/81791de6-6b18-4b7e-8e5a-9c2e404d1314')   AND MAINTABLE.REALM_KEY
> = REALMS.REALM_KEY AND MAINTABLE.FUNCTION_KEY = FUNCTIONS.FUNCTION_KEY
>
>     -> ;
>
>
>
> +----+-------------+---------------+-------+----------------------------------------------------------------------------------------+------------------------------+---------+-------------------------+------+--------------------------+
>
> | id | select_type | table         | type  | possible_keys
> | key                          | key_len | ref                     | rows |
> Extra                    |
>
> +----+-------------+---------------+-------+----------------------------------------------------------------------------------------+------------------------------+---------+-------------------------+------+--------------------------+
>
> |  1 | SIMPLE      | REALMS        | const | PRIMARY,AK_SAKAI_REALM_ID
> | AK_SAKAI_REALM_ID            | 767     | const                   |    1 |
> Using index              |
>
> |  1 | SIMPLE      | FUNCTIONS     | const |
> PRIMARY,IE_SAKAI_REALM_FUNCTION_NAME,SAKAI_REALM_FUNCTION_KN
> | IE_SAKAI_REALM_FUNCTION_NAME | 299     | const                   |    1 |
> Using index              |
>
> |  1 | SIMPLE      | MAINTABLE     | ref   |
> PRIMARY,FK_SAKAI_REALM_RL_FN_REALM,FK_SAKAI_REALM_RL_FN_FUNC,FJ_SAKAI_REALM_RL_FN_ROLE
> | FK_SAKAI_REALM_RL_FN_REALM   | 4       | const                   |  442 |
> Using where; Using index |
>
> |  1 | SIMPLE      | GRANTED_ROLES | ref   |
> PRIMARY,FK_SAKAI_REALM_RL_GR_REALM,FK_SAKAI_REALM_RL_GR_ROLE,SAKAI_REALM_RL_GR_RAU
> | FK_SAKAI_REALM_RL_GR_ROLE    | 4       | vula.MAINTABLE.ROLE_KEY |  491 |
> Using where              |
>
> +----+-------------+---------------+-------+----------------------------------------------------------------------------------------+------------------------------+---------+-------------------------+------+--------------------------+
>
> 4 rows in set (0.00 sec)
>
>
>
> Has anyone come across this and/or have optimizations?
>
>
>
> Regards
>
> Stepheh
>
>
>
> ---
>
> Stephen Marquard, Acting Director
>
> Centre for Educational Technology, University of Cape Town
> http://www.cet.uct.ac.za
> stephen.marquard at uct.ac.za
> Phone: +27-21-650-5037 Cell: +27-83-500-5290
>
>
>
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--
Aaron Zeckoski - Software Architect - http://tinyurl.com/azprofile

________________________________
 UNIVERSITY OF CAPE TOWN

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